nf-core

nf-core

TLDR

List existing pipelines on nf-core

$ nf-core list
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Create a new pipeline skeleton

$ nf-core create
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Lint the pipeline code

$ nf-core lint [path/to/directory]
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Bump software versions in pipeline recipe

$ nf-core bump-version [path/to/directory] [new_version]
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Launch an nf-core pipeline

$ nf-core launch [pipeline_name]
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Download an nf-core pipeline for offline use

$ nf-core download [pipeline_name]
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